March 2010 Archives by thread

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Starting: Mon Mar 1 04:17:04 EST 2010
Ending: Wed Mar 31 18:14:19 EDT 2010
Messages: 396

• [BioCatalogue-developers] Important Rails vulnerability - we need to fix for this release   Eric Nzuobontane
  • [BioCatalogue-developers] Important Rails vulnerability - we need to fix for this release   Jiten Bhagat
    • [BioCatalogue-developers] Important Rails vulnerability - we need to fix for this release   Eric Nzuobontane
      • [BioCatalogue-developers] Important Rails vulnerability - we need to fix for this release   Jiten Bhagat
• [BioCatalogue-developers] about blocking an ip   Eric Nzuobontane
  • [BioCatalogue-developers] about blocking an ip   Jiten Bhagat
• [BioCatalogue-developers] [1643] trunk/app/controllers/search_controller.rb: Bugfix for search by data link   noreply at rubyforge.org
• [BioCatalogue-developers] [1644] trunk: Various style fixes.   noreply at rubyforge.org
• [BioCatalogue-developers] [1645] trunk/app/controllers/favourites_controller.rb: Disabled remembering of tab after adding a favourite.   noreply at rubyforge.org
• [BioCatalogue-developers] [1646] trunk/app/helpers/application_helper.rb: Bugfix for links in contributors box on homepage.   noreply at rubyforge.org
• [BioCatalogue-developers] [1647] trunk/public/stylesheets/styles.css: Style fix   noreply at rubyforge.org
• [BioCatalogue-developers] [1648] trunk/script/biocatalogue/api/tests/json_tests.rb: Fixed typo   noreply at rubyforge.org
• [BioCatalogue-developers] [1649] trunk/license.txt: Updated copyright dates on licenses   noreply at rubyforge.org
• [BioCatalogue-developers] Tasks list   Jiten Bhagat
  • [BioCatalogue-developers] Tasks list   Franck Tanoh
    • [BioCatalogue-developers] Tasks list   Jiten Bhagat
      • [BioCatalogue-developers] Tasks list   Franck Tanoh
      • [BioCatalogue-developers] Tasks list   Jiten Bhagat
  • [BioCatalogue-developers] Tasks list   Jiten Bhagat
    • [BioCatalogue-developers] Tasks list   Eric Nzuobontane
      • [BioCatalogue-developers] Tasks list   Jiten Bhagat
      • [BioCatalogue-developers] Tasks list   Jiten Bhagat
      • [BioCatalogue-developers] Tasks list   Franck Tanoh
      • [BioCatalogue-developers] Tasks list   Jiten Bhagat
      • [BioCatalogue-developers] Tasks list   Eric Nzuobontane
• [BioCatalogue-developers] [1650] trunk/app/models/user.rb: Fix for users annotations collection   noreply at rubyforge.org
• [BioCatalogue-developers] [Task #2927] filters disappear when I switch between different views   noreply at rubyforge.org
• [BioCatalogue-developers] [1651] trunk/app/models/test_script.rb: allow all plain text files to be uploaded as scripts   noreply at rubyforge.org
• [BioCatalogue-developers] [1652] trunk/app/models/test_script.rb: Added 'application/x-ruby' to list of allowed content types for test script.   noreply at rubyforge.org
• [BioCatalogue-developers] [1653] trunk: REST API work: implemented XML for <testScript>   noreply at rubyforge.org
• [BioCatalogue-developers] [1654] trunk/app/controllers/application_controller.rb: Point API consumers to the api docs when an error occurs   noreply at rubyforge.org
• [BioCatalogue-developers] [1655] trunk: REST API work: modifications of the <searchByData> results API endpoint (XML), and added to schema.   noreply at rubyforge.org
• [BioCatalogue-developers] [1656] trunk: add submitter to test scripts and show submitter in UI   noreply at rubyforge.org
• [BioCatalogue-developers] [1657] trunk: REST API work: added <withSummaries> to <services> index.   noreply at rubyforge.org
• [BioCatalogue-developers] [1658] trunk/app/views: Various fixes for test scripts work.   noreply at rubyforge.org
• [BioCatalogue-developers] [1659] trunk/script/biocatalogue/embrace_test_scripts_import.rb: add default activated_at time for imported scripts   noreply at rubyforge.org
• [BioCatalogue-developers] [Task #2928] Add soap_operations to search results web UI   noreply at rubyforge.org
• [BioCatalogue-developers] [1660] trunk: Added soap_operations to search results.   noreply at rubyforge.org
• [BioCatalogue-developers] Testing on test.biocatalogue.org   Jiten Bhagat
  • [BioCatalogue-developers] Testing on test.biocatalogue.org   Franck Tanoh
    • [BioCatalogue-developers] Testing on test.biocatalogue.org   Jiten Bhagat
    • [BioCatalogue-developers] Testing on test.biocatalogue.org   Eric Nzuobontane
      • [BioCatalogue-developers] Testing on test.biocatalogue.org   Jiten Bhagat
      • [BioCatalogue-developers] Testing on test.biocatalogue.org   Eric Nzuobontane
      • [BioCatalogue-developers] Testing on test.biocatalogue.org   Jiten Bhagat
• [BioCatalogue-developers] Fwd: "Linked Data is merely more data" paper   Franck Tanoh
• [BioCatalogue-developers] [1662] trunk/app/views/services/_index_filters.html.erb: Reduced the number of filters shown for tags, to improve perf.   noreply at rubyforge.org
• [BioCatalogue-developers] [Task #2929] Add caching to filters in filtering sidebar   noreply at rubyforge.org
• [BioCatalogue-developers] [Task #2930] Tag filters limiting not working properly   noreply at rubyforge.org
• [BioCatalogue-developers] [1663] trunk/app/views/services/_index_filters.html.erb: Reverted previous change to tag filters limiting due to a bug in the tag filters limiting code .   noreply at rubyforge.org
• [BioCatalogue-developers] [1664] trunk/app/models/test_script.rb: Test Scripts work : bug fix   noreply at rubyforge.org
• [BioCatalogue-developers] [1665] trunk/vendor/embrace_scripts/src: run only activated scripts   noreply at rubyforge.org
• [BioCatalogue-developers] [1666] trunk/lib/bio_catalogue/filtering/services.rb: Minor fix   noreply at rubyforge.org
• [BioCatalogue-developers] [1667] branches/integration-jan10: NEW REST SUPPORT WORK ( done after prep for first March release)   noreply at rubyforge.org
• [BioCatalogue-developers] [1668] trunk/lib/bio_catalogue/search.rb: Search should only happen is search is actually on!   noreply at rubyforge.org
• [BioCatalogue-developers] [1669] trunk:   noreply at rubyforge.org
• [BioCatalogue-developers] Maintenance message   Jiten Bhagat
• [BioCatalogue-developers] [1670] trunk: REST API work: implemented /soap_operations index ( with tag filtering) and /soap_operations/filters.   noreply at rubyforge.org
• [BioCatalogue-developers] [1671] trunk: REST API work: added <soapOperations> to the related links for <tag>.   noreply at rubyforge.org
• [BioCatalogue-developers] [1672] trunk/app/views/layouts/application_wide.html.erb: Made the header message bigger and also search engine friendly (it won' t get revealed to search engines).   noreply at rubyforge.org
• [BioCatalogue-developers] [1673] trunk: REST API work: renamed <versions> to <variants>, and < hostedVersion> in <serviceDeployment> to <providedVariant>.   noreply at rubyforge.org
• [BioCatalogue-developers] [1674] trunk/script/biocatalogue/api/tests: REST API work: added tests for service deployment.   noreply at rubyforge.org
• [BioCatalogue-developers] [1675] trunk/lib/bio_catalogue/filtering/soap_operations.rb: Disabled some debugging comments.   noreply at rubyforge.org
• [BioCatalogue-developers] [1676] trunk: REST API work: fixes.   noreply at rubyforge.org
• [BioCatalogue-developers] [Task #2931] Refactor filtering UI to use new filters code   noreply at rubyforge.org
• [BioCatalogue-developers] [Task #2932] Add link to "filter these services" on search   noreply at rubyforge.org
• [BioCatalogue-developers] [1677] trunk/app/views: Work on service discovery and filtering: now there is the option to "filter these services" after a search is done, which will take the user to the services index with the search already applied and filters ready for use .   noreply at rubyforge.org
• [BioCatalogue-developers] [1678] trunk/app/views/search/show.html.erb: Disabled the " filter these services" link on search, for now.   noreply at rubyforge.org
• [BioCatalogue-developers] [Task #2933] show filters pop up when 'filterservice' is selected   noreply at rubyforge.org
• [BioCatalogue-developers] [1679] trunk: REST API work: the structure of the <filters> top level resource and <filters> in parameters have been changed to something like this:   noreply at rubyforge.org
• [BioCatalogue-developers] [Biocatalogue-support] - Functional testing for BioCatalogue   Eric Nzuobontane
  • [BioCatalogue-developers] [Biocatalogue-support] - Functional testing for BioCatalogue   Jiten Bhagat
• [BioCatalogue-developers] [1680] trunk/vendor/embrace_scripts/src/testscript_runner.py: send only status message back to app, not log   noreply at rubyforge.org
• [BioCatalogue-developers] [1681] branches/integration-jan10/app: REST SUPPORT WORK   noreply at rubyforge.org
• [BioCatalogue-developers] [Task #2934] ATOM feed for latest activity feed   noreply at rubyforge.org
• [BioCatalogue-developers] Biocat developer list   Franck Tanoh
• [BioCatalogue-developers] [1682] trunk/app/views/api/show.xml.builder: REST API work: added soap_operations index and it's filters to the root document.   noreply at rubyforge.org
• [BioCatalogue-developers] BioCatalogue update   Eric Nzuobontane
  • [BioCatalogue-developers] BioCatalogue update   Franck Tanoh
    • [BioCatalogue-developers] BioCatalogue update   Eric Nzuobontane
• [BioCatalogue-developers] [1683] branches/integration-jan10: REST SUPPORT WORK   noreply at rubyforge.org
• [BioCatalogue-developers] [1684] trunk/app/views/services/show.xml.builder: bugfix : show_versions -> show_variants   noreply at rubyforge.org
• [BioCatalogue-developers] [1685] branches/integration-jan10/app/views/rest_parameters: REST SUPPORT WORK   noreply at rubyforge.org
• [BioCatalogue-developers] [1686] trunk/app/views/soap_services/deployments.xml.builder: REST API work : bugfix for /soap_services/{id}/deployments   noreply at rubyforge.org
• [BioCatalogue-developers] [1687] trunk/lib/bio_catalogue/util.rb: REST API work: implemented finders for SoapInput and SoapOutput for /lookup   noreply at rubyforge.org
• [BioCatalogue-developers] [1688] trunk/lib/bio_catalogue/stats.rb: Bugfix for stats generation   noreply at rubyforge.org
• [BioCatalogue-developers] embrace test harness   Eric Nzuobontane
• [BioCatalogue-developers] Request to register web components   Eric Nzuobontane
  • [BioCatalogue-developers] Request to register web components   Jiten Bhagat
    • [BioCatalogue-developers] Request to register web components   Mannie Tagarira
      • [BioCatalogue-developers] Request to register web components   Eric Nzuobontane
      • [BioCatalogue-developers] Request to register web components   Mannie Tagarira
• [BioCatalogue-developers] confirmation e-mail   Franck Tanoh
• [BioCatalogue-developers] [1689] trunk: Rest API work: moved the service types data to the root of < service>.   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB:genome.imim.es:runMetaAlignmentGFF' changed to Passed   utopia at cs.man.ac.uk
  • [BioCatalogue-developers] EMBRACE Registry: 'INB:genome.imim.es:runMetaAlignmentGFF' changed to Passed   Franck Tanoh
    • [BioCatalogue-developers] EMBRACE Registry: 'INB:genome.imim.es:runMetaAlignmentGFF' changed to Passed   Eric Nzuobontane
      • [BioCatalogue-developers] EMBRACE Registry: 'INB:genome.imim.es:runMetaAlignmentGFF' changed to Passed   Steve Pettifer
      • [BioCatalogue-developers] EMBRACE Registry: 'INB:genome.imim.es:runMetaAlignmentGFF' changed to Passed   David Thorne
• [BioCatalogue-developers] EMBRACE Registry: 'INB:genome.imim.es:runMultiPairwiseMetaAlignmentGFF' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:unzipTrajectory' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:inb.bsc.es:getProdomDomainsFromUniProt' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:genome.imim.es:runMetaAlignmentGFF' changed to Passed   Eric Nzuobontane
  • [BioCatalogue-developers] EMBRACE Registry: 'INB:genome.imim.es:runMetaAlignmentGFF' changed to Passed   Franck Tanoh
    • [BioCatalogue-developers] EMBRACE Registry: 'INB:genome.imim.es:runMetaAlignmentGFF' changed to Passed   Jiten Bhagat
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:getTrajectoryRmsFromMD_Trajectory' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] Request to register web components   Eric Nzuobontane
  • [BioCatalogue-developers] Request to register web components   Jiten Bhagat
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:runEmbossPepcoilFromSequence' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1690] trunk/lib/bio_catalogue/monitoring/status.rb: changed label for successful tests from "Success" to "Passed" to make it consistent with embrace terminology   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:runEmbossConsFromAlignment' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:runEmbossDigestFromSequence' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:plotArrayXYData' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getTermsFromProduct' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:getActiveSiteInterfaceFromPDBId' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:runPratt' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:parseSecondaryStructureFromPHDText' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:getPDBIdsFromLigandId' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'GeneWiz' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:frommmCifToNDBText' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:runNucleosomePotential' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:cnio.es:displayAlignmentFromTreeDetAnnotation' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:runTTSFinder' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1691] trunk: REST API work: implemented /soap_operations/{id}/annotations. xml?include=inputs, outputs   noreply at rubyforge.org
• [BioCatalogue-developers] [1692] trunk: REST API work: updated monitoring status labels.   noreply at rubyforge.org
• [BioCatalogue-developers] [1693] trunk: REST API work: further updates to monitoring status labels.   noreply at rubyforge.org
• [BioCatalogue-developers] [1694] trunk/public/2009/xml/rest/schema-v1.xsd: REST API work: schema updates for root <biocatalogue> resource.   noreply at rubyforge.org
• [BioCatalogue-developers] [Fwd: [Biocatalogue-support] Warning: could not send message for past 3 hours]   Jiten Bhagat
  • [BioCatalogue-developers] [Fwd: [Biocatalogue-support] Warning: could not send message for past 3 hours]   Eric Nzuobontane
    • [BioCatalogue-developers] [Fwd: [Biocatalogue-support] Warning: could not send message for past 3 hours]   Jiten Bhagat
      • [BioCatalogue-developers] [Fwd: [Biocatalogue-support] Warning: could not send message for past 3 hours]   Eric Nzuobontane
      • [BioCatalogue-developers] [Fwd: [Biocatalogue-support] Warning: could not send message for past 3 hours]   Jiten Bhagat
• [BioCatalogue-developers] [1695] trunk: REST API work: requests to the first page of tags is now cached for 5 mins (only for API) .   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getEntryFromFSSP' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getHSSPIDsFromUniprot' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] http://rpc232.cs.man.ac.uk:81/   Eric Nzuobontane
  • [BioCatalogue-developers] http://rpc232.cs.man.ac.uk:81/   Jiten Bhagat
    • [BioCatalogue-developers] http://rpc232.cs.man.ac.uk:81/   Jiten Bhagat
• [BioCatalogue-developers] New biocatalogue-hackers list   Jiten Bhagat
• [BioCatalogue-developers] [1696] trunk/app/views: REST API work: always show the <related> section when showing resources as result items.   noreply at rubyforge.org
• [BioCatalogue-developers] [1697] trunk/app/views/soap_operations/api/_result_item.xml.builder: REST API work: missing from previous commit.   noreply at rubyforge.org
• [BioCatalogue-developers] [1698] trunk/app: REST API work: implemented include= all query parameter so you can ask for all sections for that resource.   noreply at rubyforge.org
• [BioCatalogue-developers] [1699] trunk: REST API work: added <withAll> link to <related> for <service >.   noreply at rubyforge.org
• [BioCatalogue-developers] [1700] trunk: REST API work: added <annotationsOnAll> to <related> for < soapOperation>.   noreply at rubyforge.org
• [BioCatalogue-developers] [1701] trunk/app: REST API work: changed /soap_operations/{id}/annotations? include=inputs, outputs to /soap_operations/{id}/annotations?also=inputs, outputs ...   noreply at rubyforge.org
• [BioCatalogue-developers] [1702] trunk: REST API work: for all filterable indexes, introduced < filtersFromHere> to distinguish between a 'clean' link to the filters vs one that can be used to build up filters.   noreply at rubyforge.org
• [BioCatalogue-developers] [1703] trunk: REST API work: added more <withXXX> links to the services index.   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getTermsFromProduct' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] Some comments from Hamish on BioCatalogue   Eric Nzuobontane
  • [BioCatalogue-developers] Some comments from Hamish on BioCatalogue   Jiten Bhagat
• [BioCatalogue-developers] [1704] trunk/app/controllers: Better error handling when a search exception occurs.   noreply at rubyforge.org
• [BioCatalogue-developers] [1705] trunk: REST API work: renamed <filtersFromHere> to < filtersOnCurrentResults>.   noreply at rubyforge.org
• [BioCatalogue-developers] [1706] trunk: REST API work: renamed <withAll> to <withAllSections>.   noreply at rubyforge.org
• [BioCatalogue-developers] announcement on the friend list   Franck Tanoh
  • [BioCatalogue-developers] announcement on the friend list   Jiten Bhagat
    • [BioCatalogue-developers] announcement on the friend list   Franck Tanoh
      • [BioCatalogue-developers] announcement on the friend list   Jiten Bhagat
• [BioCatalogue-developers] [1707] trunk: REST API work: some changes to the related links for <service >   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:getCollectivityIndexesFromPCZ_Report' changed to Passed   utopia at cs.man.ac.uk
  • [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:getCollectivityIndexesFromPCZ_Report' changed to Passed   Franck Tanoh
    • [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:getCollectivityIndexesFromPCZ_Report' changed to Passed   Eric Nzuobontane
      • [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:getCollectivityIndexesFromPCZ_Report' changed to Passed   Franck Tanoh
      • [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:getCollectivityIndexesFromPCZ_Report' changed to Passed   Eric Nzuobontane
• [BioCatalogue-developers] EMBRACE Registry: 'INB:mmb.pcb.ub.es:runPHDFromBLASTText' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:cnio.es:runPrank' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:runEmbossWaterFromSequences' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:genome.imim.es:runMatScanGFFCollection' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:parseMWfromMWAnnotatedAASequence' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getUniprotIDsFromGOTerm' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1708] branches/integration-jan10: REST SUPPORT WORK   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB:mmb.pcb.ub.es:parseFeatureAASequenceFromFSOLVText' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1709] trunk: REST API work: added Agents to API.   noreply at rubyforge.org
• [BioCatalogue-developers] [1710] trunk/script/biocatalogue/api/tests/config.yml.pre: REST API work: fixed minor typo in tests config file template.   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'ConsensusPathDB' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1711] trunk: REST API work: added more useful related links to <service>.   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB:genome.imim.es:runSGP2GFF' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:fromNDBTextTommCif' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1712] trunk/app/views: REST API work: cleaned up some <related> sections, and also deleted some unnecessary views.   noreply at rubyforge.org
• [BioCatalogue-developers] [1713] trunk/app/views/soap_inputs/api/_related_links.xml.builder: Bugfix   noreply at rubyforge.org
• [BioCatalogue-developers] Dev chat   Jiten Bhagat
  • [BioCatalogue-developers] Dev chat   Jiten Bhagat
    • [BioCatalogue-developers] Dev chat   Eric Nzuobontane
  • [BioCatalogue-developers] Dev chat   Franck Tanoh
  • [BioCatalogue-developers] Dev chat   Eric Nzuobontane
• [BioCatalogue-developers] [1714] branches/integration-jan10: REST SUPPORT WORK   noreply at rubyforge.org
• [BioCatalogue-developers] [1715] branches/integration-jan10/app/views/rest_methods/show.html.erb: REST support work: changes to the REST method show view ( still to be tested).   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getPrositeAnnStructureFromPDBID' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:cnio.es:getPubMed' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:runGenewise' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:runEmbossGetorfFromSequence' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'BLAST blastp protein similarity search (CNRS IBCP)' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1716] branches/integration-jan10/app: REST support work   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'GeneWiz' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:getTrajectoryBfactorPerResidue' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:mmb.pcb.ub.es:runPMUTHotSpotFromAminoAcidSequence' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:fromMD_TrajectoryToMD_TrajectoryDCD' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1717] branches/integration-jan10/app: REST Support work   noreply at rubyforge.org
• [BioCatalogue-developers] important notes from the skype chat   Franck Tanoh
  • [BioCatalogue-developers] important notes from the skype chat   Jiten Bhagat
• [BioCatalogue-developers] [1718] branches/integration-jan10/app: Initial work on the new SOAP Operations UI.   noreply at rubyforge.org
• [BioCatalogue-developers] [1719] trunk: Merged integration-jan10 revisions 1635:1718 into trunk.   noreply at rubyforge.org
• [BioCatalogue-developers] test script notes   Franck Tanoh
  • [BioCatalogue-developers] test script notes   Eric Nzuobontane
• [BioCatalogue-developers] [1720] trunk: More work on the new UI for SOAP operations and REST endpoints, with a new vertical tabs system.   noreply at rubyforge.org
• [BioCatalogue-developers] auto complete not working   Franck Tanoh
  • [BioCatalogue-developers] auto complete not working   Eric Nzuobontane
    • [BioCatalogue-developers] auto complete not working   Jiten Bhagat
      • [BioCatalogue-developers] auto complete not working   Eric Nzuobontane
    • [BioCatalogue-developers] auto complete not working   Franck Tanoh
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:getPrincipalComponentFromPCZ_Report' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1721] trunk: More work on the new UI for SOAP operations and REST endpoints.   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getNucleotideSequence' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1722] trunk/app: More work on the new UI for SOAP operations and REST endpoints.   noreply at rubyforge.org
• [BioCatalogue-developers] [1723] trunk/app/helpers/application_helper.rb: Refactoring for a helper method.   noreply at rubyforge.org
• [BioCatalogue-developers] [1724] trunk/app/views/rest_parameters/_input_parameters.html.erb: Missing html escapes!!   noreply at rubyforge.org
• [BioCatalogue-developers] [1725] trunk: More work on the new UI for SOAP operations and REST endpoints.   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getPrositeAnnStructure' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'BLAST blastp protein similarity search (CNRS IBCP)' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:runMDFromAMBER_MD_Structure' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:inb.bsc.es:getEntryFromOMIM' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:getTrajectoryRmsPerResidueFromMD_Trajectory' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'ConsensusPathDB' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1726] trunk/app/views: More work on the SOAP operations UI:   noreply at rubyforge.org
• [BioCatalogue-developers] [1727] trunk/app/views/soap_services/_show_service_tabs.html.erb: Added some information text to the Operations tab of Services.   noreply at rubyforge.org
• [BioCatalogue-developers] [1728] trunk/app/views/soap_operations/_listing.html.erb: Reduced the amount of text shown for each SOAP operation in it's listings, from 700 characters to 400.   noreply at rubyforge.org
• [BioCatalogue-developers] [1729] trunk: Added a "Quick Browse" box to the top of the Operations tab to make it easier to quickly click through to an individual operation .   noreply at rubyforge.org
• [BioCatalogue-developers] [1730] trunk/public/stylesheets/styles.css: Minor style update to the quick browse box.   noreply at rubyforge.org
• [BioCatalogue-developers] [1731] trunk/public/stylesheets/styles.css: Prevent text from oveflowing on vertical tabs.   noreply at rubyforge.org
• [BioCatalogue-developers] [1732] trunk: REST support work   noreply at rubyforge.org
• [BioCatalogue-developers] [1733] trunk: Further style and layout updates for the vertical tabs.   noreply at rubyforge.org
• [BioCatalogue-developers] [1734] trunk/app: REST support work   noreply at rubyforge.org
• [BioCatalogue-developers] [1735] trunk/app: REST support work   noreply at rubyforge.org
• [BioCatalogue-developers] [1736] trunk: REST support work   noreply at rubyforge.org
• [BioCatalogue-developers] [1737] trunk: REST support work   noreply at rubyforge.org
• [BioCatalogue-developers] [1738] trunk/app/helpers/rest_services_helper.rb: REST support work   noreply at rubyforge.org
• [BioCatalogue-developers] [1739] trunk/app/views/rest_parameters/_input_parameters.html.erb: minor UI change   noreply at rubyforge.org
• [BioCatalogue-developers] [1740] trunk/script/biocatalogue/sanity_check.rb: Initial work on a " sanity_check" script which we can use to regularly check for data consistency issues etc , to help identify discrepancies in stats and generally ensure that the system is in a healthy state .   noreply at rubyforge.org
• [BioCatalogue-developers] Stats discrepancy due to orphaned data   Jiten Bhagat
  • [BioCatalogue-developers] Stats discrepancy due to orphaned data   Eric Nzuobontane
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:inb.bsc.es:fromXYDataTextToArrayFloat' changed to Failed   utopia at cs.man.ac.uk
  • [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:inb.bsc.es:fromXYDataTextToArrayFloat' changed to Failed   Franck Tanoh
    • [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:inb.bsc.es:fromXYDataTextToArrayFloat' changed to Failed   Eric Nzuobontane
• [BioCatalogue-developers] EMBRACE Registry: 'engineDB_06_08' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'engineDB_06_08' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:pdg.cnb.uam.es:getInteractionsXML' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getCDSSequence' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1741] trunk: REST support work   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:inb.bsc.es:textQueryUniprot' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:cnio.es:runSLR' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'GeneWiz' changed to Failed   utopia at cs.man.ac.uk
  • [BioCatalogue-developers] EMBRACE Registry: 'GeneWiz' changed to Failed   Jiten Bhagat
• [BioCatalogue-developers] [1742] trunk/app: REST support work   noreply at rubyforge.org
• [BioCatalogue-developers] [1743] trunk: REST support work   noreply at rubyforge.org
• [BioCatalogue-developers] [1744] trunk: REST support work   noreply at rubyforge.org
• [BioCatalogue-developers] [1745] trunk/app/models/rest_service.rb: REST support work   noreply at rubyforge.org
• [BioCatalogue-developers] [1746] trunk: REST support work   noreply at rubyforge.org
• [BioCatalogue-developers] [1747] trunk/app/views/rest_methods/show.html.erb: missed out of last commit   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'engineDB_06_08' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:searchBLOCKS' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'GeneWiz' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1748] trunk/app: REST support work   noreply at rubyforge.org
• [BioCatalogue-developers] NAR paper   Eric Nzuobontane
  • [BioCatalogue-developers] NAR paper   Jiten Bhagat
• [BioCatalogue-developers] How the NCRI folks will be using the BioCatalogue API   Franck Tanoh
  • [BioCatalogue-developers] How the NCRI folks will be using the BioCatalogue API   Jiten Bhagat
    • [BioCatalogue-developers] How the NCRI folks will be using the BioCatalogue API   Eric Nzuobontane
      • [BioCatalogue-developers] How the NCRI folks will be using the BioCatalogue API   Jiten Bhagat
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getSequencesFromENSEMBLHomology' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1749] trunk/app/models/service.rb: Consolidated the URL format for services.   noreply at rubyforge.org
• [BioCatalogue-developers] [1750] trunk/app/views/soap_operations/show.html.erb: More additions to the SOAP operations UI based on feedback from Franck.   noreply at rubyforge.org
• [BioCatalogue-developers] [1751] trunk/app/views/soap_operations/show.html.erb: More changes to the SOAP operations UI based on feedback.   noreply at rubyforge.org
• [BioCatalogue-developers] [1752] trunk/: Ignore .rvmrc file   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:inb.bsc.es:textQueryOMIM' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getPersistentFile' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1753] branches/service-ownership/: branch for initial work on service ownership/responsibility   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:cnio.es:runTargetPDAS' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getSequenceByRegionFromENSEMBL' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1754] branches/service-ownership/: deleting badly created branch   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB:mmb.pcb.ub.es:runStructurePhysicalProperties' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:multiplotArrayXYData' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] pathway common service status   Franck Tanoh
  • [BioCatalogue-developers] pathway common service status   Eric Nzuobontane
    • [BioCatalogue-developers] pathway common service status   Jiten Bhagat
      • [BioCatalogue-developers] pathway common service status   Franck Tanoh
      • [BioCatalogue-developers] pathway common service status   Eric Nzuobontane
      • [BioCatalogue-developers] pathway common service status   Franck Tanoh
      • [BioCatalogue-developers] pathway common service status   Eric Nzuobontane
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getEntryFromProsite' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:runEmbossPepinfoFromSequence' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1755] trunk/app/views/home/index.html.erb: Change text on the homepage to say that the EMBRACE registry and the BioCatalogue have now been merged .   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getEntryFromPDB' changed to Failed   utopia at cs.man.ac.uk
  • [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getEntryFromPDB' changed to Failed   Franck Tanoh
• [BioCatalogue-developers] [1756] trunk/app/controllers/lookup_controller.rb: REST API work: fix for / lookup to respect the content type requested   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB:mmb.pcb.ub.es:runPMUTHotSpotFromBLASTText' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1757] trunk/app/controllers/application_controller.rb: Bugfix: remove " limit" when generating filter links.   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'Genome Atlas' changed to Warning   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:getActiveSiteInterfaceFromPDBId' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:getStructureFromMD_Trajectory' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:loadPersistentFile' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:genome.imim.es:parseMotifMatricesFromMEME' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'BLASTatlas' changed to Warning   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:cnio.es:runS3det' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getCodonTableFromEmboss' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:getCollectivityIndexesFromPCZ_Report' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:runNucleosomePotential' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:displayDomainsFromAnnStructure' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:genome.imim.es:runMemeText' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'NetCTL - Prediction of CTL epitopes in protein sequences' changed to Warning   utopia at cs.man.ac.uk
  • [BioCatalogue-developers] EMBRACE Registry: 'NetCTL - Prediction of CTL epitopes in protein sequences' changed to Warning   Franck Tanoh
    • [BioCatalogue-developers] EMBRACE Registry: 'NetCTL - Prediction of CTL epitopes in protein sequences' changed to Warning   Eric Nzuobontane
      • [BioCatalogue-developers] EMBRACE Registry: 'NetCTL - Prediction of CTL epitopes in protein sequences' changed to Warning   Franck Tanoh
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:cnio.es:runFirestar' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1758] branches/service-ownership/: initial work on service ownership   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:unzipTrajectory' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:runPPSearchAgainstProsite' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1759] branches: branch of web service ownership from working copy   noreply at rubyforge.org
• [BioCatalogue-developers] [1760] branches/service-ownership/: remove redundant branch   noreply at rubyforge.org
• [BioCatalogue-developers] [1761] branches/web-service-ownership: completing commit of initial service-responsibility work   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:runEmbossRestrictFromSequence' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:mmb.pcb.ub.es:parsePropertySequenceFromFSOLVText' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getEntryFromSCOPPath' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getEntryFromCATH' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:genome.imim.es:fromFASTAToAminoAcidSequenceCollection' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:inb.bsc.es:getProdomDomainsFromUniProt' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:parseRulesFromMotif' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:pdg.cnb.uam.es:getInteractingMethods' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:mmb.pcb.ub.es:runPSIBlastpFromAminoAcidSequence' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:mmb.pcb.ub.es:getFlexAnalysisFromPCZ' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:genome.imim.es:runMatScanGFFCollectionVsInputMatrices' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:cnio.es:runCExonic' changed to Passed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getGOTerm' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:runEmbossTmapFromSequence' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1762] trunk/app/views: Add API docs links to the header and footer.   noreply at rubyforge.org
• [BioCatalogue-developers] [1763] trunk/app/views/soap_operations/show.html.erb: Add more descriptive page title to SOAP operation pages.   noreply at rubyforge.org
• [BioCatalogue-developers] [1764] trunk/app/views/soap_operations/_breadcrumbs.html.erb: Added breadcrumbs for the show SOAP operation page.   noreply at rubyforge.org
• [BioCatalogue-developers] [1765] trunk: Style improvements to the operations/enpoints UI.   noreply at rubyforge.org
• [BioCatalogue-developers] [1766] trunk/app/models/service_test.rb: put most recent test result(status ) at top   noreply at rubyforge.org
• [BioCatalogue-developers] [1767] trunk: REST support work   noreply at rubyforge.org
• [BioCatalogue-developers] [1768] trunk/public: Potential new tab colour.   noreply at rubyforge.org
• [BioCatalogue-developers] [1769] trunk: Added an anchor to each SOAP operation listing so that previous URLs like: http://www.biocatalogue.org/services/4#soap_operation_678 still work.   noreply at rubyforge.org
• [BioCatalogue-developers] [1770] trunk/public: New H1 and tab background styles   noreply at rubyforge.org
• [BioCatalogue-developers] [1771] trunk/app/views/rest_methods/_breadcrumbs.html.erb: Bugfix for REST methods show page breadcrumbs   noreply at rubyforge.org
• [BioCatalogue-developers] [1772] trunk: Better styles for the "Quick Browse" box.   noreply at rubyforge.org
• [BioCatalogue-developers] Am I okay to go ahead and...   Jiten Bhagat
  • [BioCatalogue-developers] Am I okay to go ahead and...   Jiten Bhagat
• [BioCatalogue-developers] [1773] trunk/public/stylesheets/styles.css: Various style tweaks, including changing the H1 style to a more basic title style.   noreply at rubyforge.org
• [BioCatalogue-developers] [1774] trunk/public/stylesheets/styles.css: Actions menu now has a background colour   noreply at rubyforge.org
• [BioCatalogue-developers] [1775] trunk: Various style and layout fixes.   noreply at rubyforge.org
• [BioCatalogue-developers] [1776] trunk/app/views/soap_operations/show.html.erb: Removed " Soap Operation:" from title in SOAP operation show page   noreply at rubyforge.org
• [BioCatalogue-developers] [1777] trunk/app/views: minor UI updates   noreply at rubyforge.org
• [BioCatalogue-developers] [1778] trunk/app/views/rest_methods: typo fix   noreply at rubyforge.org
• [BioCatalogue-developers] [1779] trunk: Added a snippet for description to the collapsed SOAP inputs and outputs boxes .   noreply at rubyforge.org
• [BioCatalogue-developers] [1780] trunk/app/helpers/application_helper.rb: Documentation update   noreply at rubyforge.org
• [BioCatalogue-developers] [1781] trunk/app/views/search: Bugfix for badly floated button on search   noreply at rubyforge.org
• [BioCatalogue-developers] [1782] trunk/app/views/soap_operations/show.html.erb: Added help text for Parameter Order field on SOAP operation show page.   noreply at rubyforge.org
• [BioCatalogue-developers] [1783] trunk/app/views/soap_operations/show.html.erb: Removed orange box around input and output names.   noreply at rubyforge.org
• [BioCatalogue-developers] [1784] trunk: When collapsed inputs and outputs boxes links are hovered over then highlight to emphasise that it is clickable .   noreply at rubyforge.org
• [BioCatalogue-developers] [1785] trunk: In the Quick Browse box on the show SOAP operation page, the selected operation is now highlighted.   noreply at rubyforge.org
• [BioCatalogue-developers] [1786] trunk/app/views/soap_operations/show.html.erb: Do a proper truncate on the operation names on the vertical tabs.   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB:genome.imim.es:runMetaAlignment' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1787] trunk: Better tabs styles to make it more obvious what the current selected tab is .   noreply at rubyforge.org
• [BioCatalogue-developers] [1788] trunk/public/stylesheets/styles.css: Dropped down a notch the darkness of the borders of the different tabs styles .   noreply at rubyforge.org
• [BioCatalogue-developers] [1789] trunk/public/stylesheets/styles.css: Small style tweaks   noreply at rubyforge.org
• [BioCatalogue-developers] [1790] trunk/public/stylesheets/styles.css: Small style tweaks   noreply at rubyforge.org
• [BioCatalogue-developers] [1791] trunk/app/views/annotations/_tags_flat.html.erb: typo fix   noreply at rubyforge.org
• [BioCatalogue-developers] [1792] trunk: Added a shadow style and applied it to categories.   noreply at rubyforge.org
• [BioCatalogue-developers] [1793] trunk/public/stylesheets/styles.css: Added shadow styles to the tabbed boxes   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getPrositeAnnStructureFromPDBID' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getNucleotideSequence' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:runEmbossPatmatdb' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getHomologiesFromEnsembl' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:frommmCifToPDBText' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getPrositeAnnStructure' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1794] trunk/app/views: - made changes to the REST UI elements to match the SOAP UI   noreply at rubyforge.org
• [BioCatalogue-developers] [1795] trunk/app: bug fix for create_expand_collapse_link() in ApplicationHelper   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:runEmbossIepFromSequence' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1796] trunk/app/views/rest_methods/show.html.erb: minor UI tweak to stop help text in the tag box from wrapping.   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'NetChop - Prediction of proteasomal cleavages (MHC ligands)' changed to Warning   utopia at cs.man.ac.uk
• [BioCatalogue-developers] endpoint help text   Franck Tanoh
• [BioCatalogue-developers] [1797] trunk/app/views/rest_methods/show.html.erb: added tooltip to the tabs in the REST UI   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:inb.bsc.es:refineTextQueryOMIM' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1798] trunk/app/views: REST support work   noreply at rubyforge.org
• [BioCatalogue-developers] Returned mail: see transcript for details   Mail Delivery Subsystem
• [BioCatalogue-developers] [1799] trunk/app/views/rest_methods: REST support work   noreply at rubyforge.org
• [BioCatalogue-developers] [1800] trunk/app/views/annotations/_categories.html.erb: Removed shadow from categories as it made them stand out too much.   noreply at rubyforge.org
• [BioCatalogue-developers] [1801] trunk/public/2009/xml/rest/schema-v1.xsd: REST API work: fixed the schema for cases where Annotations have "RestMethod", " RestParameter" or "RestRepresentation" as the annotatable.   noreply at rubyforge.org
• [BioCatalogue-developers] [1802] trunk/app/views: update REST support help text   noreply at rubyforge.org
• [BioCatalogue-developers] [1803] trunk/app/views/layouts/_footer.html.erb: Added link to " Registry Stats" in footer.   noreply at rubyforge.org
• [BioCatalogue-developers] [1804] trunk/app/views: Fixes to links   noreply at rubyforge.org
• [BioCatalogue-developers] [1805] trunk/app/views/widgets/_breadcrumbs_bar.html.erb: Moved last search notice to the left hand side based on feedback from Carole .   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB:mmb.pcb.ub.es:parseAminoAcidSequenceFromPDBText' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] [1806] trunk: Funkier UI for the last search notice box - moved from the right hand side of the breadcrumbs bar to a box that slides down at the very top of the page (Carole asked for it to be more noticeable, and the developer has giveth).   noreply at rubyforge.org
• [BioCatalogue-developers] EMBRACE Registry: 'INB:mmb.pcb.ub.es:runPSIBlastpFromFASTA' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:runEmbossAntigenicFromSequence' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB:inb.bsc.es:getEntryFromDSSP' changed to Failed   utopia at cs.man.ac.uk
• [BioCatalogue-developers] EMBRACE Registry: 'INB-dev:cnio.es:fromPrankToSLR' changed to Passed   utopia at cs.man.ac.uk

Last message date: Wed Mar 31 18:14:19 EDT 2010
Archived on: Wed Mar 31 18:14:31 EDT 2010

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